ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gj6D1 - ECOD Domain | ECOD

ECOD/Domains/e5gj6D1

e5gj6D1

UID: 001884695

PDB

Range: D:1-160
PDB: 5GJ6 chain D(all domains)
UniProt: Q9Q2P6 (all domains)

Molecule: Outer capsid protein VP4 (Hemagglutinin) [Cleaved into: Outer capsid protein VP8*; Outer capsid protein VP5*]

3D Structure

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Related Domains

Browse other domains in VP4_haemagglut →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyVP4_haemagglut(10.1.1.6)

Pfam Families

PF00426VP4_haemagglut

Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5GJ6 RCSB PDB: 5GJ6 PDBe: 5GJ6 UniProt: Q9Q2P6

Downloads

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