ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dkhB1 - ECOD Domain | ECOD

ECOD/Domains/e5dkhB1

e5dkhB1

UID: 001885836

PDB

Range: B:1381-1490
PDB: 5DKH chain B(all domains)
UniProt: P51531 (all domains)
Gene: SMARCA2

Molecule: Probable global transcription activator SNF2L2

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

(2E)-3-[(6S,9R)-4-(cyclopropylamino)-6,7,8,9-tetrahydro-5H-6,9-epiminocyclohepta[d]pyrimidin-10-yl]-1-(2-hydroxyphenyl)prop-2-en-1-one5C0
Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOL

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5DKH RCSB PDB: 5DKH PDBe: 5DKH UniProt: P51531

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.