ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kqsA1 - ECOD Domain | ECOD

ECOD/Domains/e5kqsA1

e5kqsA1

UID: 001886210

PDB

Range: A:5-266
PDB: 5KQS chain A(all domains)
UniProt: A0A024B7W1 (all domains)

Molecule: Methyltransferase

3D Structure

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Related Domains

Browse other domains in FtsJ →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyFtsJ(2003.1.5.15)

Ligands

in contact, ≤ 4 Å

7-methyl-7,8-dihydroguanosine-5'-diphosphateM7G
drugDrugBank DB01960
AdemetionineSAM
drugDrugBank DB00118

Pfam Families

FtsJ-like methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5KQS RCSB PDB: 5KQS PDBe: 5KQS UniProt: A0A024B7W1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Acetate, Glycerin, Phosphate ion)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.