ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dqoC1 - ECOD Domain | ECOD

ECOD/Domains/e5dqoC1

e5dqoC1

UID: 001886693

PDB

Range: C:272-325,C:345-456
PDB: 5DQO chain C(all domains)
UniProt: P49643 (all domains)
Gene: PRIM2

Molecule: DNA primase large subunit (DNA primase 58 kDa subunit) (p58)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_primase_lrg →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCryptochrome/photolyase FAD-binding domain-related(182)

HH-groupCryptochrome/photolyase FAD-binding domain-related(182.1)

TT-groupFe-S cluster domain of DNA primase(182.1.2)

FFamilyDNA_primase_lrg(182.1.2.1)

Pfam Families

PF04104DNA_primase_lrg

Eukaryotic and archaeal DNA primase, large subunit C-terminal domain

ClanCL0242DNA_primase_lrg

External Links

ECOD PDB View: 5DQO RCSB PDB: 5DQO PDBe: 5DQO UniProt: P49643

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure