ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5gqhA1 - ECOD Domain | ECOD

ECOD/Domains/e5gqhA1

e5gqhA1

UID: 001886803

PDB

Range: A:683-976
PDB: 5GQH chain A(all domains)
UniProt: Q02ML8 (all domains)
Gene: cas3

Molecule: CRISPR-associated nuclease/helicase Cas3 subtype I-F/YPEST (EC 3.1.-.-) (EC 3.6.4.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas3-like_C_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCas3-like_C_2(2004.1.1.233)

Pfam Families

PF22590Cas3-like_C_2

CRISPR-associated nuclease/helicase Cas3, C-terminal

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5GQH RCSB PDB: 5GQH PDBe: 5GQH UniProt: Q02ML8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure