ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5b4bB1 - ECOD Domain | ECOD

ECOD/Domains/e5b4bB1

e5b4bB1

UID: 001887501

PDB

Range: B:2-240
PDB: 5B4B chain B(all domains)
UniProt: Q9I2V0 (all domains)
Gene: lpxH

Molecule: UDP-2,3-diacylglucosamine hydrolase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Metallophos →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupMetallo-dependent phosphatases(246.2)

TT-groupMetallo-dependent phosphatases(246.2.1)

FFamilyMetallophos(246.2.1.1)

Ligands

in contact, ≤ 4 Å

(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATELP5

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00149Metallophos

Calcineurin-like phosphoesterase

ClanCL0163Calcineurin

External Links

ECOD PDB View: 5B4B RCSB PDB: 5B4B PDBe: 5B4B UniProt: Q9I2V0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure