ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5du7C1 - ECOD Domain | ECOD

ECOD/Domains/e5du7C1

e5du7C1

UID: 001887660

PDB

Range: C:57-250
PDB: 5DU7 chain C(all domains)
UniProt: O53223 (all domains)
Gene: ldtB

Molecule: L,D-transpeptidase 2 (LDT 2) (EC 2.3.2.-) (Ldt(Mt2))

3D Structure

Loading viewer...

Related Domains

Browse other domains in Big_10 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyBig_10(11.1.1.250)

Pfam Families

Bacterial Ig domain

ClanCL0159E-set

External Links

ECOD PDB View: 5DU7 RCSB PDB: 5DU7 PDBe: 5DU7 UniProt: O53223

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure