ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dj9B1 - ECOD Domain | ECOD

ECOD/Domains/e5dj9B1

e5dj9B1

UID: 001888619

PDB

Range: B:20-338
PDB: 5DJ9 chain B(all domains)
UniProt: S8EY38 (all domains)
Gene: TGME49_269110

Molecule: Ornithine aminotransferase, mitochondrial

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACIDPXG

+ 2 additives (Sulfate ion, Tromethamine)

Sulfate ionSO4
DrugBank DB14546
TromethamineTRS

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5DJ9 RCSB PDB: 5DJ9 PDBe: 5DJ9 UniProt: S8EY38

Downloads

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DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.