ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5lmsB1 - ECOD Domain | ECOD

ECOD/Domains/e5lmsB1

e5lmsB1

UID: 001889164

PDB

Range: B:7-240
PDB: 5LMS chain B(all domains)
UniProt: P80371 (all domains)
Gene: rpsB

Molecule: Small ribosomal subunit protein uS2 (30S ribosomal protein S2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupRibosomal protein S2/SIS domain(2007.6)

TT-groupRibosomal protein S2/SIS domain(2007.6.1)

FFamilyRibosomal_S2(2007.6.1.1)

Pfam Families

PF00318Ribosomal_S2

Ribosomal protein S2

ClanCL0067SIS

External Links

ECOD PDB View: 5LMS RCSB PDB: 5LMS PDBe: 5LMS UniProt: P80371

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure