ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j30YZ1 - ECOD Domain | ECOD

ECOD/Domains/e5j30YZ1

e5j30YZ1

UID: 001890975

PDB

Range: YZ:94-189
PDB: 5J30 chain YZ(all domains)
UniProt: Q5SHZ1 (all domains)
Gene: rplY

Molecule: Large ribosomal subunit protein bL25 (50S ribosomal protein L25) (TL7)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_TL5_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRibosomal protein TL5/L25 C-terminal domain-like(240)

HH-groupRibosomal protein TL5/L25 C-terminal domain-related(240.1)

TT-groupRibosomal protein TL5/L25 C-terminal domain-related(240.1.1)

FFamilyRibosomal_TL5_C(240.1.1.2)

Pfam Families

PF14693Ribosomal_TL5_C

Ribosomal protein TL5, C-terminal domain

External Links

ECOD PDB View: 5J30 RCSB PDB: 5J30 PDBe: 5J30 UniProt: Q5SHZ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure