ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cyuB1 - ECOD Domain | ECOD

ECOD/Domains/e4cyuB1

e4cyuB1

UID: 001900704

PDB

Range: B:1-158
PDB: 4CYU chain B(all domains)

Molecule: 7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN-PYROPHOSPHOKINASE

3D Structure

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Related Domains

Browse other domains in HPPK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-group6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK(304.45)

TT-group6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK(304.45.1)

FFamilyHPPK(304.45.1.1)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
Magnesium ionMG
metal

+ 1 additive (Tromethamine)

Pfam Families

7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)

External Links

ECOD PDB View: 4CYU RCSB PDB: 4CYU PDBe: 4CYU

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

TromethamineTRS

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.