ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dpdA1 - ECOD Domain | ECOD

ECOD/Domains/e5dpdA1

e5dpdA1

UID: 001905758

PDB

Range: A:447-553
PDB: 5DPD chain A(all domains)
UniProt: O05979 (all domains)
Gene: RP789

Molecule: Uncharacterized protein RP789

3D Structure

Loading viewer...

Related Domains

Browse other domains in PKMT_2nd →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyPKMT_2nd(101.1.2.211)

Pfam Families

PF21782WHD_PKMT

PKMT, C-terminal winged helix domain

ClanCL0123HTH

External Links

ECOD PDB View: 5DPD RCSB PDB: 5DPD PDBe: 5DPD UniProt: O05979

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure