ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dpdB3 - ECOD Domain | ECOD

ECOD/Domains/e5dpdB3

e5dpdB3

UID: 001905763

PDB

Range: B:43-334
PDB: 5DPD chain B(all domains)
UniProt: O05979 (all domains)
Gene: RP789

Molecule: Uncharacterized protein RP789

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_31 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_31(2003.1.5.82)

Pfam Families

PF13847Methyltransf_31

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5DPD RCSB PDB: 5DPD PDBe: 5DPD UniProt: O05979

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure