ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5symB1 - ECOD Domain | ECOD

ECOD/Domains/e5symB1

e5symB1

UID: 001907408

PDB

Range: B:8-230
PDB: 5SYM chain B(all domains)
UniProt: O75608 (all domains)
Gene: LYPLA1

Molecule: Acyl-protein thioesterase 1

3D Structure

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Related Domains

Browse other domains in Abhydrolase_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyAbhydrolase_2(7579.1.1.18)

Ligands

in contact, ≤ 4 Å

N-[2-chloro-5-(trifluoromethyl)phenyl]-2-[4-(furan-2-carbonyl)piperazin-1-yl]acetamide71Q
Chloride ionCL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF02230Abhydrolase_2

Phospholipase/Carboxylesterase

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 5SYM RCSB PDB: 5SYM PDBe: 5SYM UniProt: O75608

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.