ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5fua21 - ECOD Domain | ECOD

ECOD/Domains/e5fua21

e5fua21

UID: 001909083

PDB

Range: 2:15-297
PDB: 5FUA chain 2(all domains)
UniProt: P03088 (all domains)

Molecule: Major capsid protein VP1 (Major structural protein VP1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Polyoma_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPolyoma_coat(10.2.1.6)

Pfam Families

PF00718Polyoma_coat

Polyomavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5FUA RCSB PDB: 5FUA PDBe: 5FUA UniProt: P03088

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure