ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3jbmB1 - ECOD Domain | ECOD

ECOD/Domains/e3jbmB1

e3jbmB1

UID: 001910396

PDB

Range: B:51-213
PDB: 3JBM chain B(all domains)
UniProt: A0A1L1QJU5 (all domains)

Molecule: Virus-like particle of orange-spotted grouper nervous necrosis virus

3D Structure

Loading viewer...

Related Domains

Browse other domains in Capsid-VNN →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCapsid-VNN(10.2.1.49)

Pfam Families

PF11729Capsid-VNN

nodavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 3JBM RCSB PDB: 3JBM PDBe: 3JBM UniProt: A0A1L1QJU5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure