ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lk1F3 - ECOD Domain | ECOD

ECOD/Domains/e4lk1F3

e4lk1F3

UID: 001916013

PDB

Range: F:5-113
PDB: 4LK1 chain F(all domains)
UniProt: P00579 (all domains)
Gene: rpoD

Molecule: RNA polymerase sigma factor RpoD (Sigma-70)

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupRNA polymerase sigma factor rpoD N-terminal domain(3498)

HH-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1)

TT-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1.1)

FFamily(3498.1.1.1)

Pfam Families

PF00140Sigma70_r1_2

Sigma-70 factor, region 1.2

PF03979Sigma70_r1_1

Sigma-70 factor, region 1.1

External Links

ECOD PDB View: 4LK1 RCSB PDB: 4LK1 PDBe: 4LK1 UniProt: P00579

Downloads

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