ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m1hA2 - ECOD Domain | ECOD

ECOD/Domains/e5m1hA2

e5m1hA2

UID: 001916720

RepresentativePDB

Range: A:386-479
PDB: 5M1H chain A(all domains)
UniProt: P14349 (all domains)
Gene: gag

Molecule: Gag polyprotein (Pr71Gag) [Cleaved into: Gag protein (p68Gag); p3 (p3Gag)]

3D Structure

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Related Domains

Browse other domains in Gag_FV_central →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_FV_central(170.1.1.6)

Pfam Families

PF20672Gag_FV_central

Spumavirus Gag polyprotein, conserved central domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 5M1H RCSB PDB: 5M1H PDBe: 5M1H UniProt: P14349

Downloads

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