ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ehdb1 - ECOD Domain | ECOD

ECOD/Domains/e5ehdb1

e5ehdb1

UID: 001916790

PDB

Range: b:14-118
PDB: 5EHD chain b(all domains)
UniProt: P06748 (all domains)
Gene: NPM1

Molecule: Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Nucleolar protein NO38) (Numatrin)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Nucleoplasmin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyNucleoplasmin(10.2.1.31)

Pfam Families

PF03066Nucleoplasmin

Nucleoplasmin/nucleophosmin domain

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5EHD RCSB PDB: 5EHD PDBe: 5EHD UniProt: P06748

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure