ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kovN1 - ECOD Domain | ECOD

ECOD/Domains/e5kovN1

e5kovN1

UID: 001917251

PDB

Range: N:429-644
PDB: 5KOV chain N(all domains)
UniProt: Q82446 (all domains)
Gene: ORF2

Molecule: Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Core protein VP34; Spike protein VP27; Spike protein VP25]

3D Structure

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Related Domains

Browse other domains in Astro_capsid_p →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyAstro_capsid_p(1.1.7.30)

Pfam Families

PF12226Astro_capsid_p

Turkey astrovirus capsid protein

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 5KOV RCSB PDB: 5KOV PDBe: 5KOV UniProt: Q82446

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