ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5kovS1 - ECOD Domain | ECOD

ECOD/Domains/e5kovS1

e5kovS1

UID: 001917253

PDB

Range: S:429-644
PDB: 5KOV chain S(all domains)
UniProt: Q82446 (all domains)
Gene: ORF2

Molecule: Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Core protein VP34; Spike protein VP27; Spike protein VP25]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Astro_capsid_p →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyAstro_capsid_p(1.1.7.30)

Pfam Families

PF12226Astro_capsid_p

Turkey astrovirus capsid protein

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 5KOV RCSB PDB: 5KOV PDBe: 5KOV UniProt: Q82446

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure