ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5taoA1 - ECOD Domain | ECOD

ECOD/Domains/e5taoA1

e5taoA1

UID: 001918437

PDB

Range: A:5-282,A:326-357,A:387-432
PDB: 5TAO chain A(all domains)
UniProt: D4GTL2 (all domains)
Gene: aceB

Molecule: Malate synthase

3D Structure

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Related Domains

Browse other domains in MSH_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMSH_C(2002.1.1.256)

Ligands

in contact, ≤ 4 Å

Glyoxylic acidGLV
drugDrugBank DB04343
Chloride ionCL
Potassium ionK

Pfam Families

Malate synthase H C-terminal domain

External Links

ECOD PDB View: 5TAO RCSB PDB: 5TAO PDBe: 5TAO UniProt: D4GTL2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Sodium ionNA

metal

LEAD (II) IONPB

metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.