ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lnkJ1 - ECOD Domain | ECOD

ECOD/Domains/e5lnkJ1

e5lnkJ1

UID: 001921075

PDB

Range: J:1-175
PDB: 5LNK chain J(all domains)
UniProt: O78757 (all domains)
Gene: MT-ND6

Molecule: Mitochondrial complex I, ND6 subunit

3D Structure

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Related Domains

Browse other domains in Oxidored_q3 →

Classification

AArchitectureextended segments(a.20)

XX-groupNADH-quinone oxidoreductase subunit J(3579)

HH-groupNADH-quinone oxidoreductase subunit J(3579.1)

TT-groupNADH-quinone oxidoreductase subunit J(3579.1.1)

FFamilyOxidored_q3(3579.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Pfam Families

PF00499Oxidored_q3

NADH-ubiquinone/plastoquinone oxidoreductase chain 6

External Links

ECOD PDB View: 5LNK RCSB PDB: 5LNK PDBe: 5LNK UniProt: O78757

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.