ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lzbz7 - ECOD Domain | ECOD

ECOD/Domains/e5lzbz7

e5lzbz7

UID: 001921169

PDB

Range: z:1-168
PDB: 5LZB chain z(all domains)
UniProt: P14081 (all domains)
Gene: selB

Molecule: Selenocysteine-specific elongation factor

3D Structure

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Related Domains

Browse other domains in GTP_EFTU →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGTP_EFTU(2004.1.1.14)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid guanylate esterGNP
drugDrugBank DB02082
SelenocysteineSEC
drugDrugBank DB02345

Pfam Families

PF00009GTP_EFTU

Elongation factor Tu GTP binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5LZB RCSB PDB: 5LZB PDBe: 5LZB UniProt: P14081

Downloads

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Magnesium ion

metal

Shown in the structure viewer. Drug annotations from DrugDomain.