ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hm4B1 - ECOD Domain | ECOD

ECOD/Domains/e5hm4B1

e5hm4B1

UID: 001921818

PDB

Range: B:21-59,B:162-271,B:518-560
PDB: 5HM4 chain B(all domains)
UniProt: Q9X0V3 (all domains)
Gene: TM_1226

Molecule: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 5HM4 RCSB PDB: 5HM4 PDBe: 5HM4 UniProt: Q9X0V3

Downloads

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