ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hm4B3 - ECOD Domain | ECOD

ECOD/Domains/e5hm4B3

e5hm4B3

UID: 001921820

PDB

Range: B:60-161
PDB: 5HM4 chain B(all domains)
UniProt: Q9X0V3 (all domains)
Gene: TM_1226

Molecule: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOligo-peptide binding protein (OPPA) insertion domain(304.136)

TT-groupOligo-peptide binding protein (OPPA) insertion domain(304.136.1)

FFamilySBP_bac_5(304.136.1.1)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 5HM4 RCSB PDB: 5HM4 PDBe: 5HM4 UniProt: Q9X0V3

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