ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pdiR1 - ECOD Domain | ECOD

ECOD/Domains/e1pdiR1

e1pdiR1

UID: 001925870

PDB

Range: R:330-527
PDB: 1PDI chain R(all domains)
UniProt: P10930 (all domains)
Gene: 12

Molecule: Short tail fiber protein gp12 (Gene product 12) (gp12)

3D Structure

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Related Domains

Browse other domains in Collar,S_tail_recep_bd →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupgp11/gp12 receptor-binding domain(877)

HH-groupgp11/gp12 receptor-binding domain(877.1)

TT-groupgp11/gp12 receptor-binding domain(877.1.1)

FFamilyCollar,S_tail_recep_bd(877.1.1.3)

Pfam Families

Phage Tail Collar Domain

ClanCL0779Head_shaft

PF14928S_tail_recep_bd

Short tail fibre protein receptor-binding domain

External Links

ECOD PDB View: 1PDI RCSB PDB: 1PDI PDBe: 1PDI UniProt: P10930

Downloads

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