ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4m6xB2 - ECOD Domain | ECOD

ECOD/Domains/e4m6xB2

e4m6xB2

UID: 001926607

PDB

Range: B:91-337
PDB: 4M6X chain B(all domains)
UniProt: Q643C8 (all domains)
Gene: mppJ

Molecule: Methyltransferase MppJ

3D Structure

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Related Domains

Browse other domains in Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_25(2003.1.5.81)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
(3R)-2-oxo-3-phenylbutanoic acid56D
Calcium ionCA

Pfam Families

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4M6X RCSB PDB: 4M6X PDBe: 4M6X UniProt: Q643C8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

FE (III) IONFE

metal

(2R)-2-hydroxy-3-phenylpropanoic acidHF2

Shown in the structure viewer. Drug annotations from DrugDomain.