ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sztA4 - ECOD Domain | ECOD

ECOD/Domains/e5sztA4

e5sztA4

UID: 001933955

PDB

Range: A:625-748
PDB: 5SZT chain A(all domains)
UniProt: P19821 (all domains)
Gene: polA

Molecule: DNA polymerase I, thermostable

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturealpha arrays(a.6)

XX-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964)

HH-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1)

TT-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1.1)

FFamilyDNA_pol_A(4964.1.1.1)

Ligands

in contact, ≤ 4 Å

7-(N-(10-hydroxydecanoyl)-aminopentenyl)-7-deaza-2'-dATP72J
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Acetate)

Acetate

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 5SZT RCSB PDB: 5SZT PDBe: 5SZT UniProt: P19821

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.