ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dgvm11 - ECOD Domain | ECOD

ECOD/Domains/e5dgvm11

e5dgvm11

UID: 001934309

PDB

Range: m1:6-174
PDB: 5DGV chain m1(all domains)
UniProt: Q3E757 (all domains)
Gene: RPL11B

Molecule: Large ribosomal subunit protein uL5B (60S ribosomal protein L11-B) (L16) (RP39) (YL22)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L5,Ribosomal_L5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L5(882)

HH-groupRibosomal protein L5(882.1)

TT-groupRibosomal protein L5(882.1.1)

FFamilyRibosomal_L5,Ribosomal_L5_C(882.1.1.2)

Pfam Families

PF00281Ribosomal_L5

Ribosomal protein L5

ClanCL0652S24e_L23_L15e

PF00673Ribosomal_L5_C

ribosomal L5P family C-terminus

External Links

ECOD PDB View: 5DGV RCSB PDB: 5DGV PDBe: 5DGV UniProt: Q3E757

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure