ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5mdvV1 - ECOD Domain | ECOD

ECOD/Domains/e5mdvV1

e5mdvV1

UID: 001934406

PDB

Range: V:1-94
PDB: 5MDV chain V(all domains)
UniProt: P68919 (all domains)
Gene: rplY

Molecule: Large ribosomal subunit protein bL25 (50S ribosomal protein L25)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L25p →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L25-like(239)

HH-groupRibosomal protein L25-like(239.1)

TT-groupRibosomal protein L25-like(239.1.1)

FFamilyRibosomal_L25p(239.1.1.3)

Pfam Families

PF01386Ribosomal_L25p

Ribosomal L25p family

ClanCL0733Ribosomal_L25

External Links

ECOD PDB View: 5MDV RCSB PDB: 5MDV PDBe: 5MDV UniProt: P68919

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure