ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5m3jC7 - ECOD Domain | ECOD

ECOD/Domains/e5m3jC7

e5m3jC7

UID: 001935217

PDB

Range: C:492-688
PDB: 5M3J chain C(all domains)
UniProt: Q5V8X3 (all domains)
Gene: PB2

Molecule: Polymerase basic protein 2 (RNA-directed RNA polymerase subunit P3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in this classification →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPB2 '627' domain-related(3232)

HH-groupPB2 '627' domain-related(3232.1)

TT-groupPolymerase basic protein 2 (PB2) '627' domain(3232.1.1)

FFamily(3232.1.1.1)

Pfam Families

PF00604Flu_PB2_5th

Influenza RNA polymerase PB2 CAP binding domain

PF20951Flu_PB2_6th

Influenza RNA polymerase PB2 6th domain

External Links

ECOD PDB View: 5M3J RCSB PDB: 5M3J PDBe: 5M3J UniProt: Q5V8X3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure