ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m1bB2 - ECOD Domain | ECOD

ECOD/Domains/e5m1bB2

e5m1bB2

UID: 001942796

PDB

Range: B:121-325
PDB: 5M1B chain B(all domains)
UniProt: P0AAB5 (all domains)
Gene: ubiD

Molecule: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.98) (Polyprenyl p-hydroxybenzoate decarboxylase)

3D Structure

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Related Domains

Browse other domains in UbiD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyUbiD(1.1.5.11)

Pfam Families

3-octaprenyl-4-hydroxybenzoate carboxy-lyase Rift-related domain

ClanCL0336FMN-binding

External Links

ECOD PDB View: 5M1B RCSB PDB: 5M1B PDBe: 5M1B UniProt: P0AAB5

Downloads

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