ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m1bC2 - ECOD Domain | ECOD

ECOD/Domains/e5m1bC2

e5m1bC2

UID: 001942799

PDB

Range: C:326-491
PDB: 5M1B chain C(all domains)
UniProt: P0AAB5 (all domains)
Gene: ubiD

Molecule: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.98) (Polyprenyl p-hydroxybenzoate decarboxylase)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupUbiD C-terminal domain-like(327.12)

TT-groupUbiD C-terminal domain-like(327.12.1)

FFamilyUbiD_C(327.12.1.1)

Pfam Families

3-octaprenyl-4-hydroxybenzoate carboxy-lyase C-terminal domain

External Links

ECOD PDB View: 5M1B RCSB PDB: 5M1B PDBe: 5M1B UniProt: P0AAB5

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