ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5kmrA1 - ECOD Domain | ECOD

ECOD/Domains/e5kmrA1

e5kmrA1

UID: 001948920

PDB

Range: A:104-253
PDB: 5KMR chain A(all domains)
UniProt: F5L3B8 (all domains)
Gene: CathTA2_0279

Molecule: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
NadideNAD
drugDrugBank DB14128

Shown in the structure viewer.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5KMR RCSB PDB: 5KMR PDBe: 5KMR UniProt: F5L3B8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.