ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j4b2Q1 - ECOD Domain | ECOD

ECOD/Domains/e5j4b2Q1

e5j4b2Q1

UID: 001952189

PDB

Range: 2Q:1-141
PDB: 5J4B chain 2Q(all domains)
UniProt: P60489 (all domains)
Gene: rplP

Molecule: Large ribosomal subunit protein uL16 (50S ribosomal protein L16)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L16 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupRibosomal protein L10e(325.1.5)

FFamilyRibosomal_L16(325.1.5.1)

Pfam Families

PF00252Ribosomal_L16

Ribosomal protein L16p/L10e

ClanCL0021OB

External Links

ECOD PDB View: 5J4B RCSB PDB: 5J4B PDBe: 5J4B UniProt: P60489

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure