ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5hl7N1 - ECOD Domain | ECOD

ECOD/Domains/e5hl7N1

e5hl7N1

UID: 001952581

PDB

Range: N:2-117
PDB: 5HL7 chain N(all domains)
UniProt: Q2FXQ1 (all domains)
Gene: rplT

Molecule: 50S ribosomal protein L20

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L20 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPABP domain-like(143)

HH-groupRibosomal protein L20(143.2)

TT-groupRibosomal protein L20(143.2.1)

FFamilyRibosomal_L20(143.2.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (HEPES)

HEPESEPE

Pfam Families

PF00453Ribosomal_L20

Ribosomal protein L20

External Links

ECOD PDB View: 5HL7 RCSB PDB: 5HL7 PDBe: 5HL7 UniProt: Q2FXQ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.