ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tgmO31 - ECOD Domain | ECOD

ECOD/Domains/e5tgmO31

e5tgmO31

UID: 001953267

PDB

Range: O3:2-107
PDB: 5TGM chain O3(all domains)
UniProt: P05744 (all domains)
Gene: RPL33A

Molecule: 60S ribosomal protein L33-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L35Ae →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyRibosomal_L35Ae(1.1.7.8)

Ligands

in contact, ≤ 4 Å

PhenylalaninePHE
drugDrugBank DB00120within 5 Å only
Magnesium ionMG
metal
osmium (III) hexammineOHX

Pfam Families

PF01247Ribosomal_L35Ae

Ribosomal protein L35Ae

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 5TGM RCSB PDB: 5TGM PDBe: 5TGM UniProt: P05744

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.