ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ij1A2 - ECOD Domain | ECOD

ECOD/Domains/e5ij1A2

e5ij1A2

UID: 002010339

PDB

Range: A:249-370
PDB: 5IJ1 chain A(all domains)
UniProt: A3CM52 (all domains)
Gene: srpA

Molecule: Platelet-binding glycoprotein

3D Structure

Loading viewer...

Related Domains

Browse other domains in GspA_SrpA_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGspA_SrpA_N(11.1.1.292)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20164GspA_SrpA_N

GspA/SrpA SigLec-like domain

ClanCL0159E-set

External Links

ECOD PDB View: 5IJ1 RCSB PDB: 5IJ1 PDBe: 5IJ1 UniProt: A3CM52

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure