ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j0nH1 - ECOD Domain | ECOD

ECOD/Domains/e5j0nH1

e5j0nH1

UID: 002010361

PDB

Range: H:1-60
PDB: 5J0N chain H(all domains)
UniProt: P03700 (all domains)
Gene: int

Molecule: Integrase (EC 2.7.7.-) (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Arm-DNA-bind_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupGCC-box binding domain-like(252.2)

TT-groupGCC-box binding domain-like(252.2.1)

FFamilyArm-DNA-bind_1(252.2.1.3)

Pfam Families

PF09003Arm-DNA-bind_1

Bacteriophage lambda integrase, Arm DNA-binding domain

ClanCL0081MBD-like

External Links

ECOD PDB View: 5J0N RCSB PDB: 5J0N PDBe: 5J0N UniProt: P03700

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure