ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5u30A1 - ECOD Domain | ECOD

ECOD/Domains/e5u30A1

e5u30A1

UID: 002028024

RepresentativePDB

Range: A:1-27,A:387-516
PDB: 5U30 chain A(all domains)
UniProt: T0D7A2 (all domains)
Gene: cas12b

Molecule: CRISPR-associated endonuclease Cas12b (EC 3.1.-.-) (AacC2c1) (CRISPR-associated endonuclease C2c1)

3D Structure

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Related Domains

Browse other domains in C2c1_WED-II →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupSmall protein B (SmpB)(2.21)

TT-groupSmall protein B (SmpB)(2.21.1)

FFamilyC2c1_WED-II(2.21.1.2)

Pfam Families

PF22204C2c1_WED-II

CRISPR-associated endonuclease C2c1, wedge domain, second region

External Links

ECOD PDB View: 5U30 RCSB PDB: 5U30 PDBe: 5U30 UniProt: T0D7A2

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