ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5u30A2 - ECOD Domain | ECOD

ECOD/Domains/e5u30A2

e5u30A2

UID: 002028025

RepresentativePDB

Range: A:28-386
PDB: 5U30 chain A(all domains)
UniProt: T0D7A2 (all domains)
Gene: cas12b

Molecule: CRISPR-associated endonuclease Cas12b (EC 3.1.-.-) (AacC2c1) (CRISPR-associated endonuclease C2c1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in C2c1_helical_1st →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease first helical domain(1070)

HH-groupCRISPR-associated endonuclease C2c1 first helical domain(1070.2)

TT-groupCRISPR-associated endonuclease C2c1 first helical domain(1070.2.1)

FFamilyC2c1_helical_1st(1070.2.1.1)

Pfam Families

PF22202C2c1_helical_1st

CRISPR-associated endonuclease C2c1 first helical domain

External Links

ECOD PDB View: 5U30 RCSB PDB: 5U30 PDBe: 5U30 UniProt: T0D7A2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure