ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wqeA5 - ECOD Domain | ECOD

ECOD/Domains/e5wqeA5

e5wqeA5

UID: 002029588

PDB

Range: A:517-624,A:806-915,A:948-992
PDB: 5WQE chain A(all domains)
UniProt: T0D7A2 (all domains)
Gene: cas12b

Molecule: CRISPR-associated endonuclease Cas12b (EC 3.1.-.-) (AacC2c1) (CRISPR-associated endonuclease C2c1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in C2c1_RuvC-like →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyC2c1_RuvC-like(2484.1.1.92)

Pfam Families

PF22126C2c1_RuvC-like

C2c1 CRISPR-Cas endonuclease, RuvC-like domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 5WQE RCSB PDB: 5WQE PDBe: 5WQE UniProt: T0D7A2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure