ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t2pF1 - ECOD Domain | ECOD

ECOD/Domains/e5t2pF1

e5t2pF1

UID: 002032226

PDB

Range: F:1-149
PDB: 5T2P chain F(all domains)
UniProt: L7R9I1 (all domains)
Gene: C

Molecule: Core protein

3D Structure

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Related Domains

Browse other domains in Hepatitis_core →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHepatitis B viral capsid (hbcag)(625)

HH-groupHepatitis B viral capsid (hbcag)(625.1)

TT-groupHepatitis B viral capsid (hbcag)(625.1.1)

FFamilyHepatitis_core(625.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
4-fluoranyl-3-(4-oxidanylpiperidin-1-yl)sulfonyl-~{N}-[3,4,5-tris(fluoranyl)phenyl]benzamideK89

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA

Pfam Families

PF00906Hepatitis_core

Hepatitis core antigen

External Links

ECOD PDB View: 5T2P RCSB PDB: 5T2P PDBe: 5T2P UniProt: L7R9I1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.