ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wreB1 - ECOD Domain | ECOD

ECOD/Domains/e5wreB1

e5wreB1

UID: 002032513

PDB

Range: B:1-142
PDB: 5WRE chain B(all domains)
UniProt: L7R9I1 (all domains)
Gene: C

Molecule: Core protein

3D Structure

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Related Domains

Browse other domains in Hepatitis_core →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHepatitis B viral capsid (hbcag)(625)

HH-groupHepatitis B viral capsid (hbcag)(625.1)

TT-groupHepatitis B viral capsid (hbcag)(625.1.1)

FFamilyHepatitis_core(625.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-1-[[(4R)-4-(2-chloranyl-4-fluoranyl-phenyl)-5-methoxycarbonyl-2-(1,3-thiazol-2-yl)-1,4-dihydropyrimidin-6-yl]methyl]-4,4-bis(fluoranyl)pyrrolidine-2-carboxylic acid7TL
Chloride ionCL

+ 2 additives (Glycerin, Isopropyl alcohol)

Glycerin

Pfam Families

PF00906Hepatitis_core

Hepatitis core antigen

External Links

ECOD PDB View: 5WRE RCSB PDB: 5WRE PDBe: 5WRE UniProt: L7R9I1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Isopropyl alcoholIPA

Shown in the structure viewer. Drug annotations from DrugDomain.