ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5umdd1 - ECOD Domain | ECOD

ECOD/Domains/e5umdd1

e5umdd1

UID: 002034384

PDB

Range: d:2-77
PDB: 5UMD chain d(all domains)
UniProt: Q8II62 (all domains)
Gene: PF3D7_1130100

Molecule: 60S ribosomal protein L38

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L38e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupSRP9/14-like(896)

HH-groupSignal recognition particle alu RNA binding heterodimer SRP9/14-related(896.1)

TT-groupSignal recognition particle alu RNA binding heterodimer SRP9/14-related(896.1.1)

FFamilyRibosomal_L38e(896.1.1.1)

Pfam Families

PF01781Ribosomal_L38e

Ribosomal L38e protein family

External Links

ECOD PDB View: 5UMD RCSB PDB: 5UMD PDBe: 5UMD UniProt: Q8II62

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure