ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4uz3A1 - ECOD Domain | ECOD

ECOD/Domains/e4uz3A1

e4uz3A1

UID: 002035755

PDB

Range: A:16-114
PDB: 4UZ3 chain A(all domains)
UniProt: Q5SLM7 (all domains)
Gene: TTHA0266

Molecule: CELL WALL-BINDING ENDOPEPTIDASE-RELATED PROTEIN

3D Structure

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Related Domains

Browse other domains in LysM →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupLysM domain(101.15)

TT-groupLysM domain(101.15.1)

FFamilyLysM(101.15.1.1)

Ligands

in contact, ≤ 4 Å

N-acetyl-alpha-D-glucosamineNDG
drugDrugBank DB03740within 5 Å only

+ 2 additives (1,4-Dioxane, Sulfate ion)

1,4-DioxaneDIO
DrugBank DB03316

Pfam Families

LysM domain

ClanCL0187LysM

External Links

ECOD PDB View: 4UZ3 RCSB PDB: 4UZ3 PDBe: 4UZ3 UniProt: Q5SLM7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.