ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5l2mA1 - ECOD Domain | ECOD

ECOD/Domains/e5l2mA1

e5l2mA1

UID: 002036809

PDB

Range: A:8-271
PDB: 5L2M chain A(all domains)
UniProt: P00352 (all domains)
Gene: ALDH1A1

Molecule: Retinal dehydrogenase 1

3D Structure

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Related Domains

Browse other domains in Aldedh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupALDH-like(7524)

HH-groupALDH-like(7524.1)

TT-groupALDH-like(7524.1.1)

FFamilyAldedh(7524.1.1.1)

Ligands

in contact, ≤ 4 Å

2,3,5-trimethyl-6-[3-oxo-3-(piperidin-1-yl)propyl]-7H-furo[3,2-g][1]benzopyran-7-one6ZY
Chloride ionCL
YTTERBIUM (III) IONYB

Pfam Families

Aldehyde dehydrogenase family

ClanCL0099ALDH-like

External Links

ECOD PDB View: 5L2M RCSB PDB: 5L2M PDBe: 5L2M UniProt: P00352

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.