ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mpbV1 - ECOD Domain | ECOD

ECOD/Domains/e5mpbV1

e5mpbV1

UID: 002038541

PDB

Range: V:18-205
PDB: 5MPB chain V(all domains)
UniProt: P43588 (all domains)
Gene: RPN11

Molecule: Ubiquitin C-terminal hydrolase RPN11 (EC 3.4.19.12) (26S proteasome regulatory subunit RPN11) (Protein MPR1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyJAB(2492.1.1.2)

Pfam Families

JAB1/Mov34/MPN/PAD-1 ubiquitin protease

ClanCL0366JAB

External Links

ECOD PDB View: 5MPB RCSB PDB: 5MPB PDBe: 5MPB UniProt: P43588

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