ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iseB1 - ECOD Domain | ECOD

ECOD/Domains/e5iseB1

e5iseB1

UID: 002041983

PDB

Range: B:136-289
PDB: 5ISE chain B(all domains)
UniProt: Q9WVG6 (all domains)
Gene: Carm1

Molecule: Histone-arginine methyltransferase CARM1

3D Structure

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Related Domains

Browse other domains in PrmA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyPrmA(2003.1.5.55)

Ligands

in contact, ≤ 4 Å

1,2-DimethoxyethaneDXE
drugDrugBank DB01749
5'-{[(3S)-3-amino-3-carboxypropyl](3-carbamimidamidopropyl)amino}-5'-deoxyadenosine6D2

+ 1 additive (3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL)

Pfam Families

Ribosomal protein L11 methyltransferase (PrmA)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5ISE RCSB PDB: 5ISE PDBe: 5ISE UniProt: Q9WVG6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL

Shown in the structure viewer. Drug annotations from DrugDomain.